Phaseolus vulgaris

Overview
GenusPhaseolus
Speciesvulgaris
Common NameCommon bean
AbbreviationP. vulgaris
PloidyDiploid
Chromosome Number2n=22
Genome Size~530 Mbp
Available Markers43,305
Available Maps36
Available QTLs879
Available MTLs2
Available GWAS124
Available Traits88
Available Genomes1
Maps
Map Name Map Details
Bean-BRB191/SEQ1027-F5
Map Type : genetic
Population Type : F5
Population Size : 128
Bean-Jamapa/Calima-RIL
Population Type : RIL
Population Size : 188
Map Type : genetic
Bean-NDZ-11002-F2
Map Type : genetic
Population Type : F2
Population Size : 87
Bean-DOR364/G19833-RIL
Map Type : genetic
Population Type : RIL
Population Size : 87
Bean-DOR364/G19833-RIL-2010
Map Type : genetic
Population Type : RIL
Population Size : 87
Bean-SEQ1006/RAZ106-F2:3
Map Type : genetic
Population Type : F2:3
Population Size : 157
Bean-PMB0225/PHA1037-RIL
Map Type : genetic
Population Type : RIL
Population Size : 185
Bean-G14519/G4825-RIL
Map Type : genetic
Population Type : RIL
Population Size : 110
Bean-WO3391/Speedvale-RIL
Map Type : genetic
Population Type : RIL
Population Size : 110
Bean-PHA0419/Beluga-RIL
Map Type : genetic
Population Type : RIL
Population Size : 179
Bean-Beluga/PHA0399-RIL
Map Type : genetic
Population Type : RIL
Population Size : 60
Bean-Gonzalez_consensus_map-2016
Map Type : genetic
Bean-PMB0225/PHA1037-RIL-2015
Map Type : genetic
Population Type : RIL
Population Size : 185
Comments : Updated version of Bean-PMB0225/PHA1037-RIL with additional markers
Bean-Cerinza/G10022-BC2
Map Type : genetic
Population Type : BC2F2:5
Population Size : 138
Bean-Cerinza/G10022-BC2-2012
Map Type : genetic
Population Type : BC2F2:5
Population Size : 138
Bean-DOR364/G19833-RIL-2008
Map Type : genetic
Population Type : RIL
Bean-Stampede/RedHawk-F2
Map Type : genetic
Population Type : F2
Population Size : 267
Bean-CAL143/IAC-UNA-RIL
Map Type : genetic
Population Type : RIL
Population Size : 380
Bean-Solwezi/[AO-1012-29-3-3A]-RIL
Map Type : genetic
Population Type : RIL
Population Size : 188
Bean-TZ-27/TZ-37-RIL
Map Type : genetic
Population Type : RIL
Population Size : 146
Bean-CIAT_MAGIC_2020-F4:6
Map Type : genetic
Population Type : MAGIC-F4:6
Population Size : 636
Bean-Puebla_152/Zorro-F4:7
Map Type : genetic
Population Type : F4:7
Population Size : 121
Bean-Solwezi/[AO-1012-29-3-3A]-F4:5-RIL
Map Type : genetic
Population Type : F4:5-RIL
Population Size : 210
Bean-Ruda/AND277-F10
Map Type : genetic
Population Type : F10
Population Size : 373
Bean-Tiber/Starozagorski-RIL
Map Type : genetic
Population Type : RIL
Population Size : 82
Bean-Tiber/Starozagorski-Integrated
Map Type : genetic
Population Type : RIL
Population Size : 82
Bean-CAL96/[MLB-49-89A]-RIL
Map Type : genetic
Population Type : RIL
Population Size : 121
Bean-IJR/AFR298-RIL
Map Type : genetic
Population Type : RIL
Population Size : 107
Bean-DOR364/XAN176-F5:7-RIL
Map Type : genetic
Population Type : RIL
Population Size : 79
Bean-DOR476/SEL1309-F5:7-RIL
Map Type : genetic
Population Type : RIL
Population Size : 100
Bean-BAT93/Jalo-RIL
Map Type : genetic
Population Type : RIL
Population Size : 75
Bean-AND277/Milenio-BC2F3
Map Type : genetic
Population Type : BC2F3
Population Size : 91
Bean-IAPAR81/LP9728-F8-RIL
Map Type : genetic
Population Type : RIL
Population Size : 160
Bean-SCR16/SMC40-F6.8-RIL
Analysis Method : Kosambi
Software : IciMapping Software v4.1
Map Type : genetic
Population Type : RIL
Population Size : 100
Bean-SMC44/SCR9-F6.8-RIL
Analysis Method : Kosambi
Software : IciMapping Software v4.1
Map Type : genetic
Population Type : RIL
Population Size : 100
Bean-SMC33/SCR16-F6.8-RIL
Analysis Method : Kosambi
Software : IciMapping Software v4.1
Map Type : genetic
Population Type : RIL
Population Size : 100
Bean-AxM_pop-RIL-F4
Map Type : genetic
Population Type : RIL-F4
Population Size : 190
Bean-BKB/LYD3-RIL-F6
Map Type : genetic
Population Size : 157
Bean-BKB/LYD3-RIL-F6-phys
Map Type : physical
Population Size : 157
Bean-BAT477/NY6020-4-F6:7
Software : JoinMap 4 and MSTmap
Map Type : genetic
Population Type : RIL F7:6
Population Size : 126
Bean-Cran09/Messina-RIL
Analysis Method : Kosambi mapping function
Software : QTL IciMapping V4.2
Map Type : genetic
Population Type : F2:7 RIL
Population Size : 138
Bean-BRSMG_Realce/BRS_FC104-F2
Analysis Method : Composite Interval Mapping
Software : MapChart
Map Type : genetic
Population Type : F2
Population Size : 161
Germplasm
NameType
AFR298accession
AND 277accession
AND277/Milenio-BC2F3population
AO-1012-29-3-3Aaccession
AxM population-RIL-F4population
BAT_477/NY6020-4-F6:7population
BAT 93accession
BAT93/Jalo-RILpopulation
Belugaaccession
Beluga/PHA0399-RILpopulation
BKB/LYD3-RIL-F6population
Black kidney beanaccession
BRB191accession
BRB191/SEQ1027-F5population
BRS FC104accession
BRSMG Realceaccession
BRSMG_Realce/BRS_FC104-F2population
CAL143accession
CAL143/IAC-UNA-RILpopulation
CAL96accession

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Libraries
The following libraries are associated with this organism.
Library NameType
SAMN02141582 VULclone
SAMN02141581 VUKclone
SAMN02087746 PV_GBbclone
SAMN01129645 Phaseolus vulgaris W6 20523 young leaves genomic DNAclone
SAMN01129644 Phaseolus vulgaris W6 20522 young leaves genomic DNAclone
SAMN01129643 Phaseolus vulgaris W6 20516 young leaves genomic DNAclone
SAMN01129642 Phaseolus vulgaris W6 18819 young leaves genomic DNAclone
SAMN01129641 Phaseolus vulgaris W6 17501 young leaves genomic DNAclone
SAMN01129640 Phaseolus vulgaris W6 17499 young leaves genomic DNAclone
SAMN01129639 Phaseolus vulgaris W6 17474 young leaves genomic DNAclone
SAMN01129638 Phaseolus vulgaris W6 17468 young leaves genomic DNAclone
SAMN01129637 Phaseolus vulgaris W6 17005 young leaves genomic DNAclone
SAMN01129636 Phaseolus vulgaris W6 17002 young leaves genomic DNAclone
SAMN01129635 Phaseolus vulgaris W6 17000 young leaves genomic DNAclone
SAMN01129634 Phaseolus vulgaris W6 16999 young leaves genomic DNAclone
SAMN01129633 Phaseolus vulgaris W6 12107 young leaves genomic DNAclone
SAMN01129632 Phaseolus vulgaris PI 535450 young leaves genomic DNAclone
SAMN01129631 Phaseolus vulgaris PI 535430 young leaves genomic DNAclone
SAMN01129630 Phaseolus vulgaris PI 535409 young leaves genomic DNAclone
SAMN01129629 Phaseolus vulgaris PI 417770 young leaves genomic DNAclone
SAMN01129628 Phaseolus vulgaris PI 417671 young leaves genomic DNAclone
SAMN01129627 Phaseolus vulgaris PI 390770 young leaves genomic DNAclone
SAMN01129626 Phaseolus vulgaris PI 326054 young leaves genomic DNAclone
SAMN01129625 Phaseolus vulgaris PI 318698 young leaves genomic DNAclone
SAMN01129624 Phaseolus vulgaris PI 310514 young leaves genomic DNAclone
SAMN01129623 Phaseolus vulgaris PI 201013 young leaves genomic DNAclone
SAMN01129622 Phaseolus vulgaris DGD 1962 young leaves genomic DNAclone
SAMN00263098 Phaseolus vulgaris CDRK PstI pUC-19clone
SAMN00182976 Phaseolus vulgaris (variety OAC Rex) / DNAclone
SAMN00178267 common bean genomic cloneclone
SAMN00188171 Phaseolus vulgaris BAT93 genomic DNA BAC libraryclone
SAMN00183864 PV_GBaclone
SAMN00184047 Phaseolus vulgaris BAT93 young leaves genomic DNAclone
SAMN00184048 Phaseolus vulgaris Jalo EEP 558 young leaves genomic DNAclone
SAMN00183453 Phaseolus-Bat-7clone
SAMN00184072 Phaseolus vulgaris 5-593 young leaves genomic DNAclone
SAMN00151869 Common bean genomic cloneclone
SAMN00151857 Phaseolus vulgaris DNA (Guzman SG)clone
SAMN00156335 Phaseolus vulgaris library (Watanabe T)clone
SAMN00169618 Phaseolus vulgaris root EST library PV_DEeclone
SAMN00169617 Phaseolus vulgaris root EST library PV_DEdclone
SAMN00170656 Phaseolus vulgaris leaf EST library PV_GEaclone
SAMN00169362 PVUSE1NGclone
SAMN00169364 PVUSE3NGclone
SAMN00169363 PVUSE2NGclone
SAMN02206258 cDNA-AFLP library of common bean roots infected by Fusarium oxysporum f.sp. phaseoliclone
SAMN00627023 Common bean full-length cDNA Libraryclone
SAMN02941308 Phaseolus vulgaris drought tolerant cultivar under 20% water regimen cDNA libraryclone
SAMN02709842 RDA-BAT 477 F - Representational Difference Analysis BAT 477 Flowering drought stressed subtractive cDNA libraryclone
SAMN02709841 RDA-Perola F- Representational Difference Analysis Perola Flowering drought stressed subtractive cDNA libraryclone
SAMN02709840 RDA-BAT 477 GF - Representational Difference Analysis BAT477 Grain Filling drought stressed subtractive cDNA libraryclone
SAMN02709839 RDA-Perola GF - Representational Difference Analysis Perola Grain Filling drought stressed subtractive cDNA libraryclone
SAMN00738531 ESTs from a SSH Library for drought stress tolerance in Phaseolus vulgaris L. roots cv. BAT 477clone
SAMN00167146 Phaseolus vulgaris salinity Subtractive Libraryclone
SAMN00783865 Bean tolerance to dry at flowering stageclone
SAMN00783864 Bean tolerance to cold at germination stageclone
SAMN00169890 Phaseolus vulgaris low phosphorous root EST libraryclone
SAMN00169857 Phaseolus vulgaris leaf EST library CIATclone
SAMN00169891 Phaseolus vulgaris high phosphorous root EST libraryclone
SAMN00169365 PVUSE4NGclone
SAMN00169818 Subtractive cDNA library of bean roots inoculated 8 and 16 h with Rhizoctonia solaniclone
SAMN00169751 Common been RACE small cDNA Libraryclone
SAMN00175662 Phaseolus vulgaris P- root EST libraryclone
SAMN00167439 Phaseolus vulgaris Nodule EST libraryclone
SAMN00165634 root hairs of Phaseolus vulgaris harvested 24 hours after inoculation with Rhizobium etliclone
SAMN00165375 Phaseolus vulgaris cv Early gallatinclone
SAMN00154360 Bean pod tissue cDNA Entry Libraryclone
SAMN00150657 Phaseolus vulgaris leaves under intermediate drought stressclone
SAMN00152348 Common bean supression subtractive hybridization libraryclone
SAMN00164860 09VNAN9clone
SAMN00164859 08VNAA8clone
SAMN00164858 07VANA7clone
SAMN00164857 06VA2clone
SAMN00153759 Pv-RHS24clone
SAMN00150608 drought stress in common beanclone
SAMN00175872 negro jamapa bean root cDNAclone
SAMN00177065 cDNA-AFLP TDF from Phaseolus vulgarisclone
SAMN00177556 cDNA-AFLP screenclone
SAMN00175661 Phaseolus vulgaris pod EST libraryclone
SAMN00175660 Phaseolus vulgaris nodule EST libraryclone
SAMN00175659 Phaseolus vulgaris leaf EST libraryclone
SAMN00175739 Phaseolus vulgaris (variety OAC Rex) / cDNAclone
SAMN00176682 Phaseolus vulgaris roots under early drought stressclone
SAMN00172339 Common bean seedling EST Library - PVEPSE2clone
SAMN00172340 Common bean seedling EST Library inoculated with anthracnose - PVEPSE3clone
SAMN00172248 Common bean leaf EST Library - PVEPLE1clone
SAMN00157353 Phaseolus vulgaris rootclone
Cal143clone
Vanhouten and Mackenzie, 1999clone